How to integrate Writer MCP with Atomic Agent

Connect Atomic Agent to Writer MCP. Summarize key findings from uploaded medical notes, generate chat responses using enterprise llm, and more using natural language, with authentication handled for you.

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Api Key

Writer is an enterprise-grade generative AI platform for building and deploying custom LLM-powered applications. Get reliable content generation, advanced RAG, and built-in AI guardrails for secure, compliant workflows.

23 Tools

Introduction

Atomic Agent is an open-source AI agent that runs on your machine and supports local models through llama.cpp. Connect it to 1,500+ apps through Composio, including Writer.

This guide uses Atomic Agent's built-in Composio integration. You need Atomic Agent v0.5.6 or later, your own Composio API key, and a Writer account. See the Atomic Agent documentation for installation instructions.

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How Atomic Agent connects to Writer

Atomic Agent connects to Composio's Tool Router over Streamable HTTP MCP. It discovers the tools needed for your request, and Composio handles account authentication.

Execution and account-connection tools follow Atomic Agent's configured approval policy. Review any approval prompt before allowing an action on your connected account.

Connect Writer to Atomic Agent

  1. Sign up or sign in to the Composio dashboard. Copy your API key.
  2. In Atomic Agent, open the Integrations tab and select Composio. Select API key, press e, paste the key, and press Enter. The tools become available immediately, without a restart.
  3. Ask Atomic Agent to do something in Writer. It searches Composio for the right tool.
  4. On first use, open the sign-in link returned in the chat. Connect your Writer account, then return to Atomic Agent to continue.

Headless setup

Add the following line to ~/.atomic-agent/.env, replacing YOUR_COMPOSIO_API_KEY with your key. Start Atomic Agent after saving the file.

bash
COMPOSIO_API_KEY=YOUR_COMPOSIO_API_KEY

What is the Writer MCP server, and what's possible with it?

The Writer MCP server is an implementation of the Model Context Protocol that connects your AI agent and assistants like Claude, Cursor, etc directly to your Writer account. It provides structured and secure access to your Writer AI platform, so your agent can perform actions like querying knowledge graphs, generating chat completions, extracting medical concepts, managing files, and orchestrating enterprise AI workflows on your behalf.

  • Conversational AI and content generation: Use your agent to generate chat-based completions and natural language responses using Writer's advanced LLMs.
  • Enterprise knowledge graph management: Create, retrieve, list, or delete knowledge graphs to organize and access structured knowledge within your organization.
  • Automated data extraction from clinical text: Extract medical entities and standardized codes (like SNOMED CT) from unstructured clinical or healthcare text for downstream analysis.
  • Application and model discovery: List available no-code agent applications and LLM models to streamline how your agent selects tools for specific tasks.
  • File management and inspection: Retrieve and review uploaded files, filter by attributes, and manage your enterprise content for further AI-driven actions.

Use Writer from Atomic Agent

With your account connected, ask Atomic Agent to work with Writer in natural language. You can connect more apps through the same Composio integration as you need them.

Visit the Atomic Agent website or inspect the Atomic Agent source code.

Troubleshooting

Why is my API key rejected?

Copy the key directly from the Composio dashboard. Atomic Agent requires ASCII characters because it sends the key in an HTTP header. Remove any extra characters introduced when copying.

Why are Composio tools unavailable after saving a key?

Check that you use Atomic Agent v0.5.6 or later and that Composio is enabled in your configuration. A "composio": { "enabled": false } setting disables the integration while keeping the saved key on disk.

Does Composio have a free plan?

The Hobby plan includes 100,000 tool calls per month. Composio-managed OAuth apps have a lower included allowance. See Composio pricing for the current limits that apply to your connection.

TOOLS

Supported Tools

Every Writer action and event your agent gets out of the box.

Add File to Knowledge Graph

Tool to add a file to a knowledge graph for indexing and retrieval.

Analyze Images

Tool to analyze images using Writer's vision capabilities.

Ask Question to Knowledge Graph

Tool to send a question to the knowledge graph and retrieve the answer.

Chat Completion

Tool to generate chat-based completions.

Create Knowledge Graph

Tool to create a new knowledge graph.

Delete File

Tool to delete a file by its ID.

Delete Graph

Tool to delete a knowledge graph by its ID.

Detect AI Content

Tool to detect whether content was generated by AI.

Download File

Tool to download the binary content of a file.

Get File

Tool to retrieve detailed information about a specific file by its ID.

List Applications

Tool to list all no-code agent applications.

List Files

Tool to list all uploaded files.

List Knowledge Graphs

Tool to retrieve a list of knowledge graphs.

List Models

Tool to list all available language models.

Medical Text Comprehension

Tool to extract medical entities and concepts from unstructured clinical text.

Parse PDF

Tool to parse and extract text content from a previously uploaded PDF file.

Remove File From Graph

Tool to remove a file from a Knowledge Graph.

Retrieve Knowledge Graph

Tool to retrieve a knowledge graph by its ID.

Text Generation

Tool to generate text based on a given prompt.

Translate Text

Tool to translate text from one language to another with support for formality, length control, and profanity masking.

Update Knowledge Graph

Tool to update an existing knowledge graph.

Upload File

Tool to upload a file to Writer.

Web Search

Tool to perform a web search.

FAQ

Frequently asked questions

With a standalone Writer MCP server, the agents and LLMs can only access a fixed set of Writer tools tied to that server. However, with the Composio Tool Router, agents can dynamically load tools from Writer and many other apps based on the task at hand, all through a single MCP endpoint.

Yes, you can. Atomic Agent fully supports MCP integration. You get structured tool calling, message history handling, and model orchestration while Tool Router takes care of discovering and serving the right Writer tools.

Yes, absolutely. You can configure which Writer scopes and actions are allowed when connecting your account to Composio. You can also bring your own OAuth credentials or API configuration so you keep full control over what the agent can do.

All sensitive data such as tokens, keys, and configuration is fully encrypted at rest and in transit. Composio is SOC 2 Type 2 compliant and follows strict security practices so your Writer data and credentials are handled as safely as possible.

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