# How to integrate Codeinterpreter MCP with Atomic Agent ```json { "title": "How to integrate Codeinterpreter MCP with Atomic Agent", "toolkit": "Codeinterpreter", "toolkit_slug": "codeinterpreter", "framework": "Atomic Agent", "framework_slug": "atomic-agent", "url": "https://composio.dev/toolkits/codeinterpreter/framework/atomic-agent", "markdown_url": "https://composio.dev/toolkits/codeinterpreter/framework/atomic-agent.md", "updated_at": "2026-08-28T15:33:29.823Z" } ``` ## Introduction Atomic Agent is an open-source AI agent that runs on your machine and supports local models through llama.cpp. Connect it to 1,500+ apps through Composio, including Codeinterpreter. This guide uses Atomic Agent's built-in Composio integration. You need Atomic Agent v0.5.6 or later, your own Composio API key, and a Codeinterpreter account. See the [Atomic Agent documentation](https://atomicagent.io/docs/?cta_placement=atomic-agent-docs) for installation instructions. ## Also integrate Codeinterpreter with - [OpenAI Agents SDK](https://composio.dev/toolkits/codeinterpreter/framework/open-ai-agents-sdk) - [Claude Agent SDK](https://composio.dev/toolkits/codeinterpreter/framework/claude-agents-sdk) - [Claude Code](https://composio.dev/toolkits/codeinterpreter/framework/claude-code) - [Claude Cowork](https://composio.dev/toolkits/codeinterpreter/framework/claude-cowork) - [Grok Bot](https://composio.dev/toolkits/codeinterpreter/framework/grok-bot) - [Codex](https://composio.dev/toolkits/codeinterpreter/framework/codex) - [OpenClaw](https://composio.dev/toolkits/codeinterpreter/framework/openclaw) - [Hermes](https://composio.dev/toolkits/codeinterpreter/framework/hermes-agent) - [Google ADK](https://composio.dev/toolkits/codeinterpreter/framework/google-adk) - [LangChain](https://composio.dev/toolkits/codeinterpreter/framework/langchain) - [Vercel AI SDK](https://composio.dev/toolkits/codeinterpreter/framework/ai-sdk) - [Mastra AI](https://composio.dev/toolkits/codeinterpreter/framework/mastra-ai) - [LlamaIndex](https://composio.dev/toolkits/codeinterpreter/framework/llama-index) - [CrewAI](https://composio.dev/toolkits/codeinterpreter/framework/crew-ai) - [Pydantic AI](https://composio.dev/toolkits/codeinterpreter/framework/pydantic-ai) - [AutoGen](https://composio.dev/toolkits/codeinterpreter/framework/autogen) ## TL;DR ### How Atomic Agent connects to Codeinterpreter Atomic Agent connects to Composio's Tool Router over Streamable HTTP MCP. It discovers the tools needed for your request, and Composio handles account authentication. Execution and account-connection tools follow Atomic Agent's configured approval policy. Review any approval prompt before allowing an action on your connected account. ## Connect Codeinterpreter to Atomic Agent ### Connect Codeinterpreter to Atomic Agent - Sign up or sign in to the [Composio dashboard](https://dashboard.composio.dev/?cta_placement=atomic-agent-api-key). Copy your API key. - In Atomic Agent, open the Integrations tab and select Composio. Select API key, press e, paste the key, and press Enter. The tools become available immediately, without a restart. - Ask Atomic Agent to do something in Codeinterpreter. It searches Composio for the right tool. - On first use, open the sign-in link returned in the chat. Connect your Codeinterpreter account, then return to Atomic Agent to continue. ### Headless setup Add the following line to ~/.atomic-agent/.env, replacing YOUR_COMPOSIO_API_KEY with your key. Start Atomic Agent after saving the file. ```bash COMPOSIO_API_KEY=YOUR_COMPOSIO_API_KEY ``` ## What is the Codeinterpreter MCP server, and what's possible with it? The Codeinterpreter MCP server is an implementation of the Model Context Protocol that connects your AI agent and assistants like Claude, Cursor, etc directly to your Codeinterpreter environment. It provides structured and secure access to interactive Python sandboxes, so your agent can run scripts, analyze data, visualize results, and manage files on your behalf. - On-demand code execution: Instantly execute Python code snippets, scripts, or notebooks and receive real-time output, including errors and logs. - Sandbox creation and management: Have your agent spin up isolated coding environments for running experiments, testing ideas, or working with data securely. - File upload and retrieval: Seamlessly upload datasets, scripts, or assets to the sandbox and fetch generated files, reports, or images for further analysis. - Terminal command automation: Direct your agent to run Linux shell commands inside the sandbox, enabling advanced automation and environment setup. - Data visualization and reporting: Generate charts, plots, and visual reports by executing code that saves outputs as files—perfect for data-driven tasks. ## Supported Tools | Tool slug | Name | Description | |---|---|---| | `CODEINTERPRETER_CREATE_SANDBOX` | Create Sandbox | Create a sandbox to execute python code in a Jupyter notebook cell. This is useful for agents to communicate, execute code, see output, read files, write files, etc. It's like you own personal computer, but in the cloud. Use /home/user folder to write/read files. | | `CODEINTERPRETER_EXECUTE_CODE` | Execute Code | Execute python code in a sandbox and return any result, stdout, stderr, and error. Use /home/user folder to write/read files. Try to not use plt.show() as the code is executed remotely. Use files for image/chart output instead. | | `CODEINTERPRETER_GET_FILE_CMD` | Get File | Get a file from the sandbox and returns the file. The files should be read from /home/user folder. | | `CODEINTERPRETER_RUN_TERMINAL_CMD` | Run Terminal Command | Run a command in the terminal and returns the stdout, stderr, and error code. Use /home/user folder to write/read files. | | `CODEINTERPRETER_UPLOAD_FILE_CMD` | Upload File | Upload a file to the sandbox environment. The files should be uploaded to the /home/user folder. | ## Supported Triggers None listed. ## Troubleshooting ### Why is my API key rejected? Copy the key directly from the Composio dashboard. Atomic Agent requires ASCII characters because it sends the key in an HTTP header. Remove any extra characters introduced when copying. ### Why are Composio tools unavailable after saving a key? Check that you use Atomic Agent v0.5.6 or later and that Composio is enabled in your configuration. A "composio": { "enabled": false } setting disables the integration while keeping the saved key on disk. ### Does Composio have a free plan? The Hobby plan includes 100,000 tool calls per month. Composio-managed OAuth apps have a lower included allowance. See [Composio pricing](/pricing) for the current limits that apply to your connection. ## Complete Code None listed. ## Conclusion ### Use Codeinterpreter from Atomic Agent With your account connected, ask Atomic Agent to work with Codeinterpreter in natural language. You can connect more apps through the same Composio integration as you need them. Visit the [Atomic Agent website](https://atomicagent.io/?cta_placement=atomic-agent-site) or inspect the [Atomic Agent source code](https://github.com/AtomicBot-ai/atomic-agent?cta_placement=atomic-agent-repo). ## How to build Codeinterpreter MCP Agent with another framework - [OpenAI Agents SDK](https://composio.dev/toolkits/codeinterpreter/framework/open-ai-agents-sdk) - [Claude Agent SDK](https://composio.dev/toolkits/codeinterpreter/framework/claude-agents-sdk) - [Claude Code](https://composio.dev/toolkits/codeinterpreter/framework/claude-code) - [Claude Cowork](https://composio.dev/toolkits/codeinterpreter/framework/claude-cowork) - [Grok Bot](https://composio.dev/toolkits/codeinterpreter/framework/grok-bot) - [Codex](https://composio.dev/toolkits/codeinterpreter/framework/codex) - [OpenClaw](https://composio.dev/toolkits/codeinterpreter/framework/openclaw) - [Hermes](https://composio.dev/toolkits/codeinterpreter/framework/hermes-agent) - [Google ADK](https://composio.dev/toolkits/codeinterpreter/framework/google-adk) - [LangChain](https://composio.dev/toolkits/codeinterpreter/framework/langchain) - [Vercel AI SDK](https://composio.dev/toolkits/codeinterpreter/framework/ai-sdk) - [Mastra AI](https://composio.dev/toolkits/codeinterpreter/framework/mastra-ai) - [LlamaIndex](https://composio.dev/toolkits/codeinterpreter/framework/llama-index) - [CrewAI](https://composio.dev/toolkits/codeinterpreter/framework/crew-ai) - [Pydantic AI](https://composio.dev/toolkits/codeinterpreter/framework/pydantic-ai) - [AutoGen](https://composio.dev/toolkits/codeinterpreter/framework/autogen) ## Related Toolkits - [Supabase](https://composio.dev/toolkits/supabase) - Supabase is an open-source backend platform offering scalable Postgres databases, authentication, storage, and real-time APIs. It lets developers build modern apps without managing infrastructure. - [GitHub](https://composio.dev/toolkits/github) - GitHub is a code hosting platform for version control and collaborative software development. It streamlines project management, code review, and team workflows in one place. - [1password](https://composio.dev/toolkits/_1password) - 1Password is a password manager and digital vault for storing logins, secrets, notes, and secure documents. It helps individuals and teams protect credentials, share access safely, and reduce password risk. - [Ably](https://composio.dev/toolkits/ably) - Ably is a real-time messaging platform for live chat and data sync in modern apps. It offers global scale and rock-solid reliability for seamless, instant experiences. - [Abuselpdb](https://composio.dev/toolkits/abuselpdb) - Abuselpdb is a central database for reporting and checking IPs linked to malicious online activity. Use it to quickly identify and report suspicious or abusive IP addresses. - [Alchemy](https://composio.dev/toolkits/alchemy) - Alchemy is a blockchain development platform offering APIs and tools for Ethereum apps. It simplifies building and scaling Web3 projects with robust infrastructure. - [Algolia](https://composio.dev/toolkits/algolia) - Algolia is a hosted search API that powers lightning-fast, relevant search experiences for web and mobile apps. It helps developers deliver instant, typo-tolerant, and scalable search without complex infrastructure. - [Anchor browser](https://composio.dev/toolkits/anchor_browser) - Anchor browser is a developer platform for AI-powered web automation. It transforms complex browser actions into easy API endpoints for streamlined web interaction. - [Apiflash](https://composio.dev/toolkits/apiflash) - Apiflash is a website screenshot API for programmatically capturing web pages. It delivers high-quality screenshots on demand for automation, monitoring, or reporting. - [Apiverve](https://composio.dev/toolkits/apiverve) - Apiverve delivers a suite of powerful APIs that simplify integration for developers. It's designed for reliability and scalability so you can build faster, smarter applications without the integration headache. - [Appcircle](https://composio.dev/toolkits/appcircle) - Appcircle is an enterprise-grade mobile CI/CD platform for building, testing, and publishing mobile apps. It streamlines mobile DevOps so teams ship faster and with more confidence. - [Appdrag](https://composio.dev/toolkits/appdrag) - Appdrag is a cloud platform for building websites, APIs, and databases with drag-and-drop tools and code editing. 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Use it to discover, compare, and evaluate 30K+ AWS Marketplace listings faster. - [Azure Monitor Activity Log](https://composio.dev/toolkits/azure_monitor_activity_log) - Azure Monitor Activity Log is Azure's service that records management and control-plane events for a subscription. Use it to audit changes, troubleshoot issues, and track resource operations across your Azure resources. - [Backendless](https://composio.dev/toolkits/backendless) - Backendless is a backend-as-a-service platform for mobile and web apps, offering database, file storage, user authentication, and APIs. It helps developers ship scalable applications faster without managing server infrastructure. - [Baserow](https://composio.dev/toolkits/baserow) - Baserow is an open-source no-code database platform for building collaborative data apps. It makes it easy for teams to organize data and automate workflows without writing code. - [Bench](https://composio.dev/toolkits/bench) - Bench is a benchmarking tool for automated performance measurement and analysis. It helps you quickly evaluate, compare, and track your systems or workflows. - [Better stack](https://composio.dev/toolkits/better_stack) - Better Stack is a monitoring, logging, and incident management solution for apps and services. It helps teams ensure application reliability and performance with real-time insights. ## Frequently Asked Questions ### What are the differences in Tool Router MCP and Codeinterpreter MCP? With a standalone Codeinterpreter MCP server, the agents and LLMs can only access a fixed set of Codeinterpreter tools tied to that server. However, with the Composio Tool Router, agents can dynamically load tools from Codeinterpreter and many other apps based on the task at hand, all through a single MCP endpoint. ### Can I use Tool Router MCP with Atomic Agent? Yes, you can. Atomic Agent fully supports MCP integration. You get structured tool calling, message history handling, and model orchestration while Tool Router takes care of discovering and serving the right Codeinterpreter tools. ### Can I manage the permissions and scopes for Codeinterpreter while using Tool Router? Yes, absolutely. You can configure which Codeinterpreter scopes and actions are allowed when connecting your account to Composio. You can also bring your own OAuth credentials or API configuration so you keep full control over what the agent can do. ### How safe is my data with Composio Tool Router? All sensitive data such as tokens, keys, and configuration is fully encrypted at rest and in transit. Composio is SOC 2 Type 2 compliant and follows strict security practices so your Codeinterpreter data and credentials are handled as safely as possible. --- [See all toolkits](https://composio.dev/toolkits) · [Composio docs](https://docs.composio.dev/llms.txt)